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Context-specific emergence and growth of the SARS-CoV-2 Delta variant
Moritz U. G. Kraemer
,
John T. McCrone
,
Verity Hill
,
Sumali Bajaj
,
Rosario Evans-Pena
,
Ben C. Lambert
,
Rhys P. D. Inward
,
Samir Bhatt
,
Erik Volz
,
Christopher Ruis
,
Simon Dellicour
,
Guy Baele
,
Alexander E. Zarebski
,
Adam Sadilek
,
Neo Wu
,
Aaron Schneider
,
Xiang Ji
,
Jayna Raghwani
,
Ben Jackson
,
Rachel Colquhoun
,
Aine Niamh O’Toole
,
Thomas P. Peacock
,
Kate Twohig
,
Simon Thelwall
,
Gavin Dabrera
,
Richard Meyers
,
Nuno Rodrigues Faria
,
Carmen Huber
,
Kamran Khan
,
Isaac I. Bogoch
,
Louis Du Plessis
,
Jeffrey C. Barrett
,
David M. Aanensen
,
William Barclay
,
Meera a Chand
,
Thomas R. Connor
,
Nicholas James Loman
,
Marc A. Suchard
,
Oliver George Pybus
,
Andrew Rambaut
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DOI
Preprint
Regularised B-splines Projected Gaussian Process Priors to Estimate Time-trends in Age-specific COVID-19 Deaths
The COVID-19 pandemic has caused severe public health consequences in the United States. In this study, we use a hierarchical Bayesian …
Mélodie Monod
,
Alexandra Blenkinsop
,
Andrea Brizzi
,
Yu Chen
,
Carlos Cardoso Correia Perello
,
Vidoushee Jogarah
,
Yuanrong Wang
,
Seth Flaxman
,
Samir Bhatt
,
Oliver Ratmann
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DOI
Quantifying Changes in Vaccine Coverage in Mainstream Media as a Result of the COVID-19 Outbreak: Text Mining Study
Background: Achieving herd immunity through vaccination depends upon the public’s acceptance, which in turn relies on their …
Bente Christensen
,
Daniel J. Laydon
,
Tadeusz Chełkowski
,
Dariusz Jemielniak
,
Michaela Vollmer
,
Samir Bhatt
,
Konrad Krawczyk
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DOI
Resurgence of malaria in Uganda despite sustained indoor residual spraying and repeated long lasting insecticidal net distributions
Five years of sustained indoor residual spraying (IRS) of insecticide from 2014 to 2019, first using a carbamate followed by an …
Adrienne Epstein
,
Catherine Maiteki‐Sebuguzi
,
Jane Frances Namuganga
,
Joaniter Immaculate Nankabirwa
,
Samuel Gonahasa
,
Jimmy Opigo
,
Sarah G. Staedke
,
Damian Rutazaana
,
Emmanuel Arinaitwe
,
Moses Robert Kamya
,
Samir Bhatt
,
Isabel Rodríguez-Barraquer
,
Bryan Greenhouse
,
Martin J. Donnelly
,
Grant Dorsey
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DOI
Misclassification bias in estimating clinical severity of SARS-CoV-2 variants – Authors' reply
Tommy Nyberg
,
Neil M. Ferguson
,
Joshua Blake
,
Wes R. Hinsley
,
Samir Bhatt
,
Daniela De Angelis
,
Simon Thelwall
,
Anne Margaret Presanis
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DOI
Seasonal variation in SARS-CoV-2 transmission in temperate climates: A Bayesian modelling study in 143 European regions
Although seasonal variation has a known influence on the transmission of several respiratory viral infections, its role in SARS-CoV-2 …
Tomáš Gavenčiak
,
Joshua Teperowski Monrad
,
Gavin Leech
,
Mrinank Sharma
,
Sören Mindermann
,
Jan Brauner
,
Samir Bhatt
,
Jan Kulveit
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Lessons from SARS-CoV-2 in India: A data-driven framework for pandemic resilience
Abstract India has seen a surge of SARS-CoV-2 infections and deaths in early part of 2021, despite having controlled the epidemic …
Maxwell Salvatore
,
Rupam Bhattacharyya
,
Soumik Purkayastha
,
Lauren Zimmermann
,
Debashree Ray
,
Aditi Hazra
,
Michael Kleinsasser
,
Thomas Mellan
,
C Whittaker
,
Seth Flaxman
,
Samir Bhatt
,
Swapnil Mishra
,
Bhramar Mukherjee
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Modeling DREAMS impact: trends in new HIV diagnoses among women attending antenatal care clinics in DREAMS countries
OBJECTIVES: To understand the impact of United States President’s Emergency Plan for AIDS Relief (PEPFAR’s) DREAMS …
Janet R. Saul
,
Caroline Cooney
,
Parviez Rana Hosseini
,
Ta’Adhmeeka Beamon
,
Nora Toiv
,
Samir Bhatt
,
Irum F. Zaidi
,
Deborah L. Birx
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PriorVAE: encoding spatial priors with variational autoencoders for small-area estimation
Gaussian processes (GPs), implemented through multivariate Gaussian distributions for a finite collection of data, are the most popular …
Elizaveta Semenova
,
Yidan Xu
,
Adam Howes
,
Theo Rashid
,
Samir Bhatt
,
Swapnil Mishra
,
Seth Flaxman
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DOI
Mask wearing in community settings reduces SARS-CoV-2 transmission
The effectiveness of mask wearing at controlling severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission has been …
Gavin Leech
,
Darren Smith
,
Joshua Teperowski Monrad
,
Jonas B. Sandbrink
,
Benedict Snodin
,
Robert Zinkov
,
Benjamin M. Rader
,
John S. Brownstein
,
Yarin Gal
,
Samir Bhatt
,
Mrinank Sharma
,
Sören Mindermann
,
Jan Brauner
,
Laurence Aitchison
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