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Unifying incidence and prevalence under a time-varying general branching process
Renewal equations are a popular approach used in modelling the number of new infections, i.e., incidence, in an outbreak. We develop a …
Mikko S. Pakkanen
,
Xenia Miscouridou
,
Penn, Matthew J.
,
Charles A. Whittaker
,
Tresnia Berah
,
Swapnil Mishra
,
Thomas A. Mellan
,
Samir Bhatt
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DOI
Preprint
Vertebrate environmental DNA from leaf swabs
Terrestrial vertebrates are threatened by anthropogenic activities around the world. The rapid biodiversity loss that ensues is most …
Christina Islas Lynggaard
,
Sébastien Calvignac‐Spencer
,
Colin A. Chapman
,
Urs Kalbitzer
,
Fabian Hubertus Leendertz
,
Patrick A. Omeja
,
Emmanuel A. Opito
,
Dipto Sarkar
,
Kristine Bohmann
,
Jan F. Gogarten
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Airborne environmental DNA captures terrestrial vertebrate diversity in nature
The current biodiversity and climate crises highlight the need for efficient tools to monitor terrestrial ecosystems. Here, we provide …
Christina Islas Lynggaard
,
Tobias Guldberg Frøslev
,
Matthew Stanley Johnson
,
Morten Tange Olsen
,
Kristine Bohmann
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Closed‐loop Nash competition for liquidity
Abstract We study a multiplayer stochastic differential game, where agents interact through their joint price impact on an asset that …
Alessandro Micheli
,
Johannes Muhle‐Karbe
,
Eyal Neuman
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Long-term exposure to air pollution and risk of SARS-CoV-2 infection and COVID-19 hospitalisation or death: Danish nationwide cohort study
Background Early ecological studies have suggested links between air pollution and risk of coronavirus disease 2019 (COVID-19), but …
Jiawei Zhang
,
Youn‐Hee Lim
,
Rina So
,
Jeanette Therming Jørgensen
,
Laust Hvas Mortensen
,
George Maria Napolitano
,
Tom Cole‐Hunter
,
Steffen H Loft
,
Samir Bhatt
,
Gerard Hoek
,
Bert Brunekreef
,
Rudi G. J. Westendorp
,
Matthias Ketzel
,
Jørgen Gustava Brandt
,
Theis Lange
,
Thea Kølsen-Fisher
,
Zorana Jovanovic Andersen
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Estimating fine age structure and time trends in human contact patterns from coarse contact data: The Bayesian rate consistency model
Since the emergence of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), large-scale social contact surveys are now …
Shozen Dan
,
Yu Chen
,
Yining Chen
,
Mélodie Monod
,
Veronika K. Jaeger
,
Samir Bhatt
,
André Karch
,
Oliver Ratmann
,
On Behalf of the Machine Learning & Global Health Network
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Intrinsic Randomness in Epidemic Modelling Beyond Statistical Uncertainty
Uncertainty can be classified as either aleatoric (intrinsic randomness) or epistemic (imperfect knowledge of parameters). The majority …
Matthew J. Penn
,
Daniel J. Laydon
,
Penn, Joseph
,
Charles A. Whittaker
,
Morgenstern, Christian
,
Oliver Ratmann
,
Swapnil Mishra
,
Mikko S. Pakkanen
,
Christl Ann Donnelly
,
Samir Bhatt
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DOI
Preprint
No evidence of sustained nonzoonotic Plasmodium knowlesi transmission in Malaysia from modelling malaria case data
Abstract Reported incidence of the zoonotic malaria Plasmodium knowlesi has markedly increased across Southeast Asia and threatens …
Kimberly Fornace
,
Hillary Mariko Topazian
,
Isobel Routledge
,
Syafie Asyraf
,
Jenarun Jelip
,
Kim A. Lindblade
,
Mohammad Saffree Jeffree
,
Pablo Ruiz Cuenca
,
Samir Bhatt
,
Kamruddin Ahmed
,
Azra C. Ghani
,
CHRIS J. DRAKELEY
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Mapping malaria incidence using routine health facility surveillance data in Uganda
INTRODUCTION: Maps of malaria risk are important tools for allocating resources and tracking progress. Most maps rely on …
Adrienne Epstein
,
Jane Frances Namuganga
,
Isaiah Nabende
,
Emmanuel Victor Kamya
,
Moses Robert Kamya
,
Grant Dorsey
,
Hugh J. W. Sturrock
,
Samir Bhatt
,
Isabel Rodríguez-Barraquer
,
Bryan Greenhouse
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An archetypes approach to malaria intervention impact mapping: a new framework and example application
BACKGROUND: As both mechanistic and geospatial malaria modeling methods become more integrated into malaria policy decisions, there is …
Amelia Bertozzi-Villa
,
Caitlin A. Bever
,
Jaline Gerardin
,
Joshua L. Proctor
,
Meikang Wu
,
Dennis Harding
,
T. Déirdre Hollingsworth
,
Samir Bhatt
,
Peter W. Gething
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