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Genomic Surveillance of Climate-Amplified Cholera Outbreak, Malawi, 2022–2023
In the aftermath of 2 extreme weather events in 2022, Malawi experienced a severe cholera outbreak; 59,325 cases and 1,774 deaths were …
Lucious Chabuka
,
Wonderful Tatenda Choga
,
Carla N. Mavian
,
Monika Moir
,
Christian Morgenstern
,
Houriiyah Tegaly
,
Abhinav Sharma
,
Eduan Wilkinson
,
Yeshnee Naidoo
,
Rhys P. D. Inward
,
Samir Bhatt
,
William Wint
,
Kamran Khan
,
Isaac I. Bogoch
,
Moritz U. G. Kraemer
,
José Lourenço
,
Cheryl Baxter
,
Massimiliano S. Tagliamonte
,
Marco Salemi
,
Richard J. Lessells
,
Collins Mitambo
,
Ronald Chitatanga
,
Joseph Bitilinyu-Bango
,
Mabvuto Chiwaula
,
Yollamu Chavula
,
Mphatso Bukhu
,
Happy Manda
,
Moses Chitenje
,
Innocent Malolo
,
Alex Ansaye Mwanyongo
,
Bernard Mvula
,
Dr Mirrium Nyenje
,
Túlio De Oliveira
,
Mathews Kagoli
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GRAPEVNE - Graphical Analytical Pipeline Development Environment for Infectious Diseases
The increase in volume and diversity of relevant data on infectious diseases and their drivers provides opportunities to generate new …
John‐Stuart Brittain
,
Joseph L.-H. Tsui
,
Rhys P. D. Inward
,
Bernardo Gutiérrez
,
Gaspary Mwanyika
,
Houriiyah Tegally
,
Tuyen Huynh
,
George Githinji
,
Sofonias Kifle Tessema
,
John T. McCrone
,
Samir Bhatt
,
Abhishek Dasgupta
,
Stephen Ratcliffe
,
Moritz U. G. Kraemer
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Socioeconomic and temporal heterogeneity in SARS-CoV-2 exposure and disease in England from May 2020 to February 2023
The impact of COVID-19 varied significantly by deprivation, ethnicity, and policy measures. We analyzed individual-level data on …
Christian Morgenstern
,
Thomas Rawson
,
Wes R. Hinsley
,
Pablo N. Perez‐Guzman
,
Samir Bhatt
,
Neil M. Ferguson
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Exploring the potential and limitations of deep learning and explainable AI for longitudinal life course analysis
BACKGROUND: Understanding the complex interplay between life course exposures, such as adverse childhood experiences and environmental …
Helen Coupland
,
Neil Scheidwasser
,
Alexandros Katsiferis
,
Megan Davies
,
Seth Flaxman
,
Naja Hulvej Rod
,
Swapnil Mishra
,
Samir Bhatt
,
H. Juliette T. Unwin
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DOI
Distinct evolutionary regimes across domains of the Plasmodium falciparum CSP gene
Malaria disease caused by parasites of genus Plasmodium places an enormous disease burden across tropical regions of the world. The …
Rusul Al-Kaisy
,
Samir Bhatt
,
David Alejandro Duchêne
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DOI
Fast and Slow Optimal Trading with Exogenous Information
We consider a stochastic game between a slow institutional investor and a high-frequency trader who are trading a risky asset and their …
Rama Cont A
,
Alessandro Micheli
,
Eyal Neuman
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DOI
Preprint
Drivers of avian genomic change revealed by evolutionary rate decomposition
Modern birds have diversified into a striking array of forms, behaviours and ecological roles. Analyses of molecular evolutionary rates …
David Alejandro Duchêne
,
Al-Aabid Chowdhury
,
Jingyi Yang
,
Maider Iglesias‐Carrasco
,
Josefin Stiller
,
Shaohong Feng
,
Samir Bhatt
,
Marcus Thomas P. Gilbert
,
Guojie Zhang
,
Joseph A. Tobias
,
Simon Y. W. Ho
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Mapping the global prevalence, incidence, and mortality of Plasmodium falciparum and Plasmodium vivax malaria, 2000–22: a spatial and temporal modelling study
BACKGROUND: Malaria remains a leading cause of illness and death globally, with countries in sub-Saharan Africa bearing a …
Daniel J. Weiss
,
Paulina A. Dzianach
,
Adam Saddler
,
Jailos Lubinda
,
Annie J. Browne
,
Michael McPhail
,
Susan F. Rumisha
,
Francesca Sanna
,
Yalemzewod Assefa Gelaw
,
Juniper Boroka Kiss
,
Sarah Hafsia
,
Rubi Jayaseelen
,
Hunter Baggen
,
Punam Amratia
,
Amelia Bertozzi-Villa
,
Olivia D Nesbit
,
Joanna L Whisnant
,
Katherine E. Battle
,
Huong Lan Thi Nguyen
,
Kefyalew Addis Alene
,
Ewan Cameron
,
Melissa A. Penny
,
Samir Bhatt
,
David L. Smith
,
Tasmin L. Symons
,
Jonathan F Mosser
,
Christopher J L Murray
,
Simon Iain Hay
,
Peter W. Gething
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Cause-specific mortality after spousal bereavement in a Danish register-based cohort
Spousal bereavement is associated with increased all-cause mortality, but less is known for cause-specific mortality. We estimated the …
Mathilde Marie Brünnich Sloth
,
Johannes Hruza
,
Laust Hvas Mortensen
,
Samir Bhatt
,
Alexandros Katsiferis
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DOI
Artificial intelligence for modelling infectious disease epidemics
Moritz U. G. Kraemer
,
Joseph L.-H. Tsui
,
Serina Y. Chang
,
Spyros Lytras
,
Mark Khurana
,
Samantha Vanderslott
,
Sumali Bajaj
,
Neil Scheidwasser
,
Jacob Liam Curran-Sebastian
,
Elizaveta Semenova
,
Mengyan Zhang
,
H. Juliette T. Unwin
,
Oliver John Watson
,
Cathal L. Mills
,
Abhishek Dasgupta
,
Luca Ferretti A
,
Samuel v. Scarpino
,
Etien Koua
,
Oliver W Morgan
,
Houriiyah Tegally
,
Ulrich Paquet
,
Loukas Moutsianas
,
Christophe Fraser
,
Neil M. Ferguson
,
Eric J. Topol
,
David Alejandro Duchêne
,
Tanja Stadler
,
Patricia Kingori
,
Michael James Parker
,
Francesca Dominici
,
Nigel Shadbolt
,
Marc A. Suchard
,
Oliver Ratmann
,
Seth Flaxman
,
Edward Charles Holmes
,
Manuel Gomez-Rodriguez
,
Bernhard Schölkopf
,
Christl Ann Donnelly
,
Oliver George Pybus
,
Simon Cauchemez
,
Samir Bhatt
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