Article-Journal

Multiple drivers of genomic novelty across ruminants
Ruminants are among the most ecologically and economically important groups of mammals and have accumulated some of the most remarkable …
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Quantifying the inclusion of cardiovascular research into clinical guidelines
BACKGROUND: The number of cardiovascular research articles is growing rapidly, but the subsequent incorporation into newer guidelines …
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Changed frequency of enterovirus hospitalisations after change of polio vaccination scheme: a nation-wide cohort study from Denmark
Introduction: This study examined whether ending oral poliovirus vaccination (OPV) increased enterovirus (EV) associated …
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Large-scale genomic surveillance reveals immunosuppression drives mutation dynamics in persistent SARS-CoV-2 infections
Persistent SARS-CoV-2 infections have been hypothesized to play a key role in the emergence of variants of concern. However, the …
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Ischemic heart disease burden and healthcare system readiness across sub-Saharan Africa
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Evaluation of clinical utility in emulated clinical trials
Dynamic treatment regimes have been proposed to personalize treatment decisions by utilizing historical patient data, but they may not …
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Global approaches to infectious disease surveillance and modeling
Human mobility, climate change and demographic trends increase the risk of pathogen spillover and expansion. Data that can inform our …
Mark Khurana, Joseph L.-H. Tsui, Bernardo Gutierrez, Ayush Chopra, Neil Scheidwasser, Harrison Bo Hua Zhu, Serina Y. Chang, David Alejandro Duchêne, Cathal L. Mills, Rhys P. D. Inward, Benjamin Reddy, John Brittain, Abhishek Dasgupta, James Sheldon, George Githinji, John S. Brownstein, Mélodie Monod, Luca Ferretti A, Sivan Bershan, Simon Tietze, Leo Ferres, Silvia Argimón, Timothy J. Dallman, Etien Koua, Oliver Ratmann, Simon Cauchemez, Lauren Ancel Meyers, Lili Su, Alessandro Vespignani, Paul Pronyk, Aine Niamh O’Toole, Andrew Rambaut, Nicholas James Loman, Edward Charles Holmes, Seth Flaxman, Nicola Mulder, Oliver W Morgan, Houriiyah Tegally, Manuel Gomez-Rodriguez, Nigel Shadbolt, Christian Tientcha Happi, Meera a Chand, Sofonias Kifle Tessema, Placide Mbala Kingebeni, Marc A. Suchard, Oliver George Pybus, Samuel v. Scarpino, Samir Bhatt, Moritz U. G. Kraemer
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Whole-genome prediction of bacterial pathogenic capacity on novel bacteria using protein language models with PathogenFinder2
MOTIVATION: Infectious diseases continue to be a leading cause of mortality and pose a significant global health threat. Thus, the …
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SARS-CoV-2 reinfections and subsequent risk of hospital-diagnosed post-acute sequelae in Denmark (2020–2022): a nationwide cohort study
Background: Post-acute sequelae of COVID-19 (PASC), or long COVID, are a public health concern. While most recover from SARS-CoV-2 …
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P1293 Rapid Urbanisation and IBD Prevalence in Rural India: Insights from a Satellite Based Deep Learning Index
Abstract Background Urbanisation has been associated with IBD, but the transition in most regions is too gradual. In rapidly …
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